 |
The Lycoming
College special thanks to the following
software suppliers: |
Molecular Biology and Bioinformatics
Projects for "Core" Courses
The Bioinformatics
exercises below have been designed and adapted over the years to use a
variety of software packages and online tools. We are currently using
DNASTAR's Lasergene package,
which they provide
free for
educational use. We have found this package to be comprehensive, easy to
use, and certainly the best for our purposes. Thanks DNASTAR!
|
|
Bio 110
- Introduction to Biology - Mr. Green Genes
|
Bio 222W
- Genetics - Cloning the Human Clotting Factor IX Gene
|
Bio 321 -
Microbiology - rRNA sequencing to identify an unknown
microbe
|
Molecular Biology and
Bioinformatics Project Assessment Survey - completed April/May,
2001.
This project has been/will be presented at the following conferences/workshops
|
The Advanced Assignment: Integrated Informatics Projcet | |
|
The mission: to study a single protein from several perspectives and integrate the information into a comprehensive description of its structure, function, expression pattern, processing, biological significance, phylogenetic distribution, and evolutionary conservation. Student-made Integrated Informatics Projects (99-06) and Protein Structure/Function Projects (98-99) | |
|
Bio437 - Molecular Biology - Spring 2004
Bio/Chem 444 - Biochemistry - Fall 2003
Bio/Chem 444 - Biochemistry - Fall 2002
Bio 437 - Molecular Biology - Spring 2002
Bio 435 - Cell Biology - Fall, 2001
|
Independent Study Project by Kevin Frederick and Mitchell Marzo, Spring 2001 Bio437 - Molecular Biology - Spring 2001
Bio/Chem 444 - Biochemistry - Spring, 2000
Bio 435 - Cell Biology - Fall, 1999
Bio/Chem 444 - Biochemistry - May Term, 1999
Bio 437 - Molecular Biology - Spring, 1999
Bio 435 - Cell Biology - Fall, 1998
|
A similar project at Davidson
College - A. Malcolm Campbell - see
also Genome Consortium for Active Teaching
(GCAT)
Bioinformatics project list- R. Croy, Durham Univ. (UK)
HotMolecBase - a database of 'hot
molecules' - from the Weizmann
Institute of Science
Bioinformatics/Molecular Modeling Links
The National Center for Biotechnology Information The RCSB Protein Data Bank EBI - the European Bioinformatics Institute DDBJ homepage - DNA Data Bank of Japan Ensembl Genome Server The Institute for Genomic Research (TIGR) Center for Biological Modeling IMB Jena Image Library of Biological Macromolecules Weizmann Institute of Science Bioinformatics and Biological Computing RasMol Home Page - Eric Martz, U. Mass. The Online Macromolecular Museum - D. Marcey, California Lutheran University Gerstein Group -- Yale Bioinformatics Molecular Models for Biochemistry -W. McClure, Carnegie Mellon Computer Applications in Biotechnology -C. Klevickis, James Madison Univ. Medical Biochemistry at the University of Kansas Medical Center Biochemistry 218 Computational Molecular Biology - D. Brutlag, Stanford U BMMB 597C Computers for Biochemists & Molecular Biologists - B. Tracy Nixon, Penn State University Bioc462 - Molecular Graphics Using Chime - University of Arizona Biochemistry in 3D - Lehninger Principles of Biochemistry Bioinformatics Course Information Page - R. Croy, Durham Univ. (UK) Biomolecular Computing Resource (BimCore) home - Emory University 1998 Molecular Graphics Art Show
Bioinformatics/Genomics Courses for
Undergraduates
Bioinformatics/Genomics Graduate Programs (email your URL to newman@lycoming.edu to be listed)
This page was created or last
modified on 11/17/05 by Jeff Newman
| Assistant Professor | Web page: http://www.lycoming.edu/~newman |
| Department of Biology | Email: newman@lycoming.edu |
| Lycoming College | Phone: 570-321-4386 |
| Williamsport PA 17701 | Fax: 570-321-4073 |
© 1998-2005 Jeffrey D. Newman
